There are some special process level solutions: heavily-doped substrate, SOI, burried layers, extra wells etc, but they are much more expensive.
Layout solutions: for heavily-doped substrate you can try to increase the distance between the noise sources and noise victims. For Lightly-dope substrate a guard ring works well.
Which ciruit are you designing? I am not an expert in this area - but does the capacitor makes so much noise? Usually people are companing about separating RF/analog from digital parts.