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TO COMPARE TWO DISCRETE SIGNALS FOR DIFFERENCE MORE 5%

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Hi
I am going to transfer the discrete sine(AC) signal to the pc using a pic16f876.Then i have to compare to signal for voltage fluctuations more than 5%
can any one help me in using matlab for obtaining the above. I will be grateful if the codes of matlab for doing the above can be passed on to me.
I am in great trouble in implementing the above so can any one help me:|
 

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